Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PCGF3-213ENST00000620529 1899 ntBASIC16.97■□□□□ 0.31
PHACTR1Q9C0D0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.97■□□□□ 0.31
PHACTR1Q9C0D0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHACTR1Q9C0D0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 AC099336.1-202ENST00000602961 463 ntBASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PHACTR1Q9C0D0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.96■□□□□ 0.3
PHACTR1Q9C0D0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.96■□□□□ 0.3
PHACTR1Q9C0D0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PHACTR1Q9C0D0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PHACTR1Q9C0D0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PHACTR1Q9C0D0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHACTR1Q9C0D0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.96■□□□□ 0.3
PHACTR1Q9C0D0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 BX005266.1-201ENST00000473402 457 ntBASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 AP000867.3-201ENST00000524675 377 ntBASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 AC064862.7-201ENST00000604520 867 ntBASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 AC091076.1-201ENST00000610741 619 ntBASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 AL358472.4-201ENST00000633140 710 ntBASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHACTR1Q9C0D0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 AC104640.1-201ENST00000562617 2109 ntBASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms