Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 AC116407.3-201ENST00000623905 1129 ntBASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 AC105917.1-201ENST00000506637 2539 ntBASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXP3Q9BZS1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.27■□□□□ 0.35
FOXP3Q9BZS1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXP3Q9BZS1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXP3Q9BZS1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXP3Q9BZS1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXP3Q9BZS1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FOXP3Q9BZS1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXP3Q9BZS1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.27■□□□□ 0.35
FOXP3Q9BZS1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 SPDYE21P-201ENST00000413323 827 ntBASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 TERC-201ENST00000602385 541 ntBASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 AP000867.4-201ENST00000641616 219 ntBASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 SIGLEC16-201ENST00000599858 1437 ntBASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXP3Q9BZS1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 AP005117.1-201ENST00000584346 1413 ntBASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 SART3-203ENST00000546611 1184 ntBASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 AC021087.4-201ENST00000563761 564 ntBASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 GGT3P-204ENST00000453783 1664 ntBASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 AC148477.5-201ENST00000625164 1645 ntBASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXP3Q9BZS1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms