Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFAF3Q9BU61 CICP20-201ENST00000443330 2801 ntBASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 AC005915.1-201ENST00000624912 2018 ntBASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 AC011498.5-201ENST00000592027 486 ntBASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 AL157888.1-201ENST00000631930 593 ntBASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 AC126755.1-201ENST00000525846 6405 ntBASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFAF3Q9BU61 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 AC007686.3-201ENST00000619017 3487 ntBASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFAF3Q9BU61 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms