Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.4■□□□□ 0.22
NPAS2Q99743 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.4■□□□□ 0.22
NPAS2Q99743 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 FAM220CP-201ENST00000395253 831 ntBASIC16.4■□□□□ 0.22
NPAS2Q99743 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NPAS2Q99743 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.4■□□□□ 0.22
NPAS2Q99743 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.4■□□□□ 0.22
NPAS2Q99743 SART3-203ENST00000546611 1184 ntBASIC16.4■□□□□ 0.22
NPAS2Q99743 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.4■□□□□ 0.22
NPAS2Q99743 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NPAS2Q99743 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.4■□□□□ 0.22
NPAS2Q99743 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.4■□□□□ 0.22
NPAS2Q99743 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.4■□□□□ 0.22
NPAS2Q99743 AL773604.1-201ENST00000617417 272 ntBASIC16.4■□□□□ 0.22
NPAS2Q99743 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.4■□□□□ 0.22
NPAS2Q99743 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NPAS2Q99743 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NPAS2Q99743 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
NPAS2Q99743 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 AC005052.1-201ENST00000625181 2492 ntBASIC16.39■□□□□ 0.21
NPAS2Q99743 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.39■□□□□ 0.21
NPAS2Q99743 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 HNRNPDP1-201ENST00000439535 754 ntBASIC16.39■□□□□ 0.21
NPAS2Q99743 RNPS1P1-201ENST00000507437 918 ntBASIC16.39■□□□□ 0.21
NPAS2Q99743 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.39■□□□□ 0.21
NPAS2Q99743 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.39■□□□□ 0.21
NPAS2Q99743 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.39■□□□□ 0.21
NPAS2Q99743 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.39■□□□□ 0.21
NPAS2Q99743 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.39■□□□□ 0.21
NPAS2Q99743 STK25P1-201ENST00000585406 838 ntBASIC16.39■□□□□ 0.21
NPAS2Q99743 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NPAS2Q99743 AL049840.3-201ENST00000602669 611 ntBASIC16.39■□□□□ 0.21
NPAS2Q99743 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS2Q99743 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS2Q99743 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS2Q99743 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
NPAS2Q99743 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NPAS2Q99743 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NPAS2Q99743 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NPAS2Q99743 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.38■□□□□ 0.21
NPAS2Q99743 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms