Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDCA3Q99618 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.16■□□□□ 0.34
CDCA3Q99618 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA3Q99618 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA3Q99618 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.16■□□□□ 0.34
CDCA3Q99618 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.16■□□□□ 0.34
CDCA3Q99618 AP002490.2-201ENST00000524791 560 ntBASIC17.16■□□□□ 0.34
CDCA3Q99618 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDCA3Q99618 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 WFDC1-204ENST00000613603 549 ntBASIC17.16■□□□□ 0.34
CDCA3Q99618 AL033527.5-201ENST00000641382 801 ntBASIC17.16■□□□□ 0.34
CDCA3Q99618 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA3Q99618 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA3Q99618 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCA3Q99618 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDCA3Q99618 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.15■□□□□ 0.34
CDCA3Q99618 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDCA3Q99618 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDCA3Q99618 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCA3Q99618 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.15■□□□□ 0.34
CDCA3Q99618 AC119751.2-201ENST00000504529 210 ntBASIC17.15■□□□□ 0.34
CDCA3Q99618 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.15■□□□□ 0.34
CDCA3Q99618 AC104596.2-201ENST00000512793 793 ntBASIC17.15■□□□□ 0.34
CDCA3Q99618 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.15■□□□□ 0.34
CDCA3Q99618 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CDCA3Q99618 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CDCA3Q99618 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCA3Q99618 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.15■□□□□ 0.34
CDCA3Q99618 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.15■□□□□ 0.34
CDCA3Q99618 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.15■□□□□ 0.34
CDCA3Q99618 MIR4259-201ENST00000584466 101 ntBASIC17.15■□□□□ 0.34
CDCA3Q99618 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDCA3Q99618 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCA3Q99618 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCA3Q99618 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDCA3Q99618 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA3Q99618 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCA3Q99618 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CDCA3Q99618 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA3Q99618 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDCA3Q99618 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDCA3Q99618 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDCA3Q99618 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 AC098850.1-201ENST00000419919 790 ntBASIC17.14■□□□□ 0.33
CDCA3Q99618 TMEM14DP-201ENST00000422205 345 ntBASIC17.14■□□□□ 0.33
CDCA3Q99618 KRT43P-201ENST00000434019 910 ntBASIC17.14■□□□□ 0.33
CDCA3Q99618 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA3Q99618 AL589987.1-201ENST00000453380 819 ntBASIC17.14■□□□□ 0.33
CDCA3Q99618 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA3Q99618 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA3Q99618 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.14■□□□□ 0.33
CDCA3Q99618 MIR4525-201ENST00000580000 75 ntBASIC17.14■□□□□ 0.33
CDCA3Q99618 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.14■□□□□ 0.33
CDCA3Q99618 MIR8072-201ENST00000614241 80 ntBASIC17.14■□□□□ 0.33
CDCA3Q99618 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.14■□□□□ 0.33
CDCA3Q99618 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA3Q99618 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA3Q99618 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA3Q99618 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.14■□□□□ 0.33
CDCA3Q99618 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDCA3Q99618 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms