Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NOTCH4Q99466 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 ARSEP1-201ENST00000420443 635 ntBASIC16.95■□□□□ 0.3
NOTCH4Q99466 INE1-201ENST00000456273 945 ntBASIC16.95■□□□□ 0.3
NOTCH4Q99466 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.95■□□□□ 0.3
NOTCH4Q99466 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH4Q99466 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 KRT17P7-201ENST00000451704 1104 ntBASIC16.94■□□□□ 0.3
NOTCH4Q99466 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 AL136982.4-201ENST00000437689 1740 ntBASIC16.94■□□□□ 0.3
NOTCH4Q99466 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 AL359881.2-201ENST00000602973 570 ntBASIC16.94■□□□□ 0.3
NOTCH4Q99466 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH4Q99466 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.94■□□□□ 0.3
NOTCH4Q99466 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NOTCH4Q99466 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 AL512384.1-201ENST00000406683 331 ntBASIC16.93■□□□□ 0.3
NOTCH4Q99466 SPDYE17-201ENST00000412399 783 ntBASIC16.93■□□□□ 0.3
NOTCH4Q99466 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NOTCH4Q99466 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.93■□□□□ 0.3
NOTCH4Q99466 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.93■□□□□ 0.3
NOTCH4Q99466 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.93■□□□□ 0.3
NOTCH4Q99466 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH4Q99466 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.93■□□□□ 0.3
NOTCH4Q99466 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.93■□□□□ 0.3
NOTCH4Q99466 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms