Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85AQ96PX6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 AC002472.2-201ENST00000442739 958 ntBASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 RN7SL204P-201ENST00000582831 262 ntBASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 AC018529.1-201ENST00000613063 361 ntBASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85AQ96PX6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 AC073389.1-201ENST00000595595 795 ntBASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 AC013467.2-201ENST00000605472 835 ntBASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms