Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GAFA1Q96PS6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 YBX2P1-201ENST00000394192 760 ntBASIC13.85□□□□□ -0.19
GAFA1Q96PS6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 AC092474.2-201ENST00000424288 719 ntBASIC13.85□□□□□ -0.19
GAFA1Q96PS6 FAM58CP-201ENST00000435741 640 ntBASIC13.85□□□□□ -0.19
GAFA1Q96PS6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 MTDHP5-201ENST00000598980 586 ntBASIC13.85□□□□□ -0.19
GAFA1Q96PS6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
GAFA1Q96PS6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 ALOX12P2-203ENST00000570921 1945 ntBASIC13.84□□□□□ -0.19
GAFA1Q96PS6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 AC099522.2-201ENST00000607001 744 ntBASIC13.84□□□□□ -0.19
GAFA1Q96PS6 AL078644.1-201ENST00000609881 752 ntBASIC13.84□□□□□ -0.19
GAFA1Q96PS6 AL161645.1-201ENST00000622716 1255 ntBASIC13.84□□□□□ -0.19
GAFA1Q96PS6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GAFA1Q96PS6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GAFA1Q96PS6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GAFA1Q96PS6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 PCGF3-213ENST00000620529 1899 ntBASIC13.83□□□□□ -0.2
GAFA1Q96PS6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms