Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.69□□□□□ -0.38
AP1S3Q96PC3 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP1S3Q96PC3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 PAUPAR-201ENST00000630360 2965 ntBASIC12.68□□□□□ -0.38
AP1S3Q96PC3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 TSPY20P-201ENST00000450910 630 ntBASIC12.68□□□□□ -0.38
AP1S3Q96PC3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 NAPSB-206ENST00000562112 1266 ntBASIC12.68□□□□□ -0.38
AP1S3Q96PC3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.68□□□□□ -0.38
AP1S3Q96PC3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms