Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 AC016027.1-202ENST00000607927 1699 ntBASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 RN7SL692P-201ENST00000464677 288 ntBASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 AC004233.3-201ENST00000607794 1269 ntBASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 AP001350.2-201ENST00000625104 1094 ntBASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 AC022144.1-201ENST00000602255 1580 ntBASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 COX5BP8-201ENST00000416911 349 ntBASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 AC007274.1-201ENST00000439805 662 ntBASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 AL138918.1-201ENST00000568306 659 ntBASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 AP001094.4-201ENST00000579008 2176 ntBASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 FRMD8P1-201ENST00000440433 1524 ntBASIC15.89■□□□□ 0.13
SLC46A1Q96NT5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 RARRES2P9-201ENST00000565168 469 ntBASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC46A1Q96NT5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms