Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 AL391256.1-201ENST00000443260 1855 ntBASIC14.59□□□□□ -0.07
CPNE2Q96FN4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE2Q96FN4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.58□□□□□ -0.07
CPNE2Q96FN4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE2Q96FN4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 PCED1CP-201ENST00000419887 785 ntBASIC14.58□□□□□ -0.08
CPNE2Q96FN4 IGHV3-47-201ENST00000425060 335 ntBASIC14.58□□□□□ -0.08
CPNE2Q96FN4 ABCD1P5-201ENST00000445663 754 ntBASIC14.58□□□□□ -0.08
CPNE2Q96FN4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 AL139011.1-202ENST00000642063 584 ntBASIC14.58□□□□□ -0.08
CPNE2Q96FN4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 HLA-A-202ENST00000376806 1854 ntBASIC14.58□□□□□ -0.08
CPNE2Q96FN4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE2Q96FN4 KRT8P49-201ENST00000604166 1432 ntBASIC14.58□□□□□ -0.08
CPNE2Q96FN4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 AP002414.1-201ENST00000391405 1147 ntBASIC14.57□□□□□ -0.08
CPNE2Q96FN4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE2Q96FN4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE2Q96FN4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE2Q96FN4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms