Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
TIFAQ96CG3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIFAQ96CG3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIFAQ96CG3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.71■□□□□ 0.43
TIFAQ96CG3 AC073439.1-201ENST00000624121 1774 ntBASIC17.71■□□□□ 0.43
TIFAQ96CG3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.71■□□□□ 0.42
TIFAQ96CG3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TIFAQ96CG3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.7■□□□□ 0.42
TIFAQ96CG3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 AL355994.2-201ENST00000447882 704 ntBASIC17.7■□□□□ 0.42
TIFAQ96CG3 AC099548.2-209ENST00000480264 625 ntBASIC17.7■□□□□ 0.42
TIFAQ96CG3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 SDHAP3-202ENST00000515467 728 ntBASIC17.7■□□□□ 0.42
TIFAQ96CG3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 TUBB1P2-201ENST00000422712 1306 ntBASIC17.7■□□□□ 0.42
TIFAQ96CG3 TUBB1P1-201ENST00000503144 1300 ntBASIC17.7■□□□□ 0.42
TIFAQ96CG3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TIFAQ96CG3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIFAQ96CG3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 MIR4492-201ENST00000581627 80 ntBASIC17.69■□□□□ 0.42
TIFAQ96CG3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.69■□□□□ 0.42
TIFAQ96CG3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIFAQ96CG3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.69■□□□□ 0.42
TIFAQ96CG3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIFAQ96CG3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.68■□□□□ 0.42
TIFAQ96CG3 AL033527.5-202ENST00000641632 1098 ntBASIC17.68■□□□□ 0.42
TIFAQ96CG3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms