Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SNX33P1-201ENST00000592116 1762 ntBASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 KLF2P4-201ENST00000451959 1225 ntBASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 SLC25A47P1-201ENST00000531577 414 ntBASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 AL589702.1-201ENST00000641229 1509 ntBASIC17.88■□□□□ 0.45
TRIM43Q96BQ3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 BRWD1P1-201ENST00000401091 371 ntBASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 AL355994.2-201ENST00000447882 704 ntBASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 RARRES2P5-201ENST00000564013 466 ntBASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 TUBB1P2-201ENST00000422712 1306 ntBASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 TUBB1P1-201ENST00000503144 1300 ntBASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 KRT8P39-201ENST00000396270 1433 ntBASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM43Q96BQ3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 BX323043.1-201ENST00000641006 1765 ntBASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms