Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 AL139010.1-201ENST00000454878 894 ntBASIC16.45■□□□□ 0.22
CLDN23Q96B33 USP32P1-208ENST00000506594 1164 ntBASIC16.45■□□□□ 0.22
CLDN23Q96B33 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 AL583810.1-201ENST00000553344 1045 ntBASIC16.45■□□□□ 0.22
CLDN23Q96B33 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 AC074044.1-201ENST00000609673 707 ntBASIC16.45■□□□□ 0.22
CLDN23Q96B33 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 MIR6869-201ENST00000619434 62 ntBASIC16.45■□□□□ 0.22
CLDN23Q96B33 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.45■□□□□ 0.22
CLDN23Q96B33 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 CDC14C-201ENST00000428251 1719 ntBASIC16.45■□□□□ 0.22
CLDN23Q96B33 LINC02012-201ENST00000608206 1725 ntBASIC16.45■□□□□ 0.22
CLDN23Q96B33 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN23Q96B33 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN23Q96B33 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 AC104596.2-201ENST00000512793 793 ntBASIC16.44■□□□□ 0.22
CLDN23Q96B33 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 TIMM17BP1-201ENST00000545713 516 ntBASIC16.44■□□□□ 0.22
CLDN23Q96B33 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 AC010319.3-201ENST00000597028 470 ntBASIC16.44■□□□□ 0.22
CLDN23Q96B33 RPSAP52-203ENST00000622976 1023 ntBASIC16.44■□□□□ 0.22
CLDN23Q96B33 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN23Q96B33 AL354751.1-201ENST00000412768 1863 ntBASIC16.44■□□□□ 0.22
CLDN23Q96B33 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN23Q96B33 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN23Q96B33 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 MIR1908-201ENST00000410394 80 ntBASIC16.43■□□□□ 0.22
CLDN23Q96B33 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN23Q96B33 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms