Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 REXO1L6P-201ENST00000603433 1515 ntBASIC20.21■□□□□ 0.83
CNKSR1Q969H4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 HCG11-201ENST00000411553 5696 ntBASIC20.21■□□□□ 0.83
CNKSR1Q969H4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 FAM86MP-201ENST00000340703 885 ntBASIC20.2■□□□□ 0.82
CNKSR1Q969H4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 BOLA2P3-201ENST00000404566 256 ntBASIC20.2■□□□□ 0.82
CNKSR1Q969H4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 AC015936.2-201ENST00000593177 259 ntBASIC20.2■□□□□ 0.82
CNKSR1Q969H4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 AL589702.1-201ENST00000641229 1509 ntBASIC20.2■□□□□ 0.82
CNKSR1Q969H4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 SNX33P1-201ENST00000592116 1762 ntBASIC20.2■□□□□ 0.82
CNKSR1Q969H4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.2■□□□□ 0.82
CNKSR1Q969H4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 SNX29P1-201ENST00000548357 1007 ntBASIC20.19■□□□□ 0.82
CNKSR1Q969H4 AC092337.1-201ENST00000568699 1129 ntBASIC20.19■□□□□ 0.82
CNKSR1Q969H4 AC008735.3-201ENST00000596646 500 ntBASIC20.19■□□□□ 0.82
CNKSR1Q969H4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 NOC2LP1-202ENST00000452600 2235 ntBASIC20.19■□□□□ 0.82
CNKSR1Q969H4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 LINC02012-201ENST00000608206 1725 ntBASIC20.19■□□□□ 0.82
CNKSR1Q969H4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR1Q969H4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 FAM8A2P-201ENST00000528813 1142 ntBASIC20.18■□□□□ 0.82
CNKSR1Q969H4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.18■□□□□ 0.82
CNKSR1Q969H4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms