Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 BX640515.1-201ENST00000617215 977 ntBASIC17.77■□□□□ 0.44
SHC3Q92529 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.77■□□□□ 0.44
SHC3Q92529 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC3Q92529 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC3Q92529 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC3Q92529 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC3Q92529 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.77■□□□□ 0.43
SHC3Q92529 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC3Q92529 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.77■□□□□ 0.43
SHC3Q92529 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC3Q92529 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC3Q92529 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.77■□□□□ 0.43
SHC3Q92529 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC3Q92529 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHC3Q92529 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC3Q92529 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SHC3Q92529 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SHC3Q92529 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC3Q92529 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC3Q92529 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC3Q92529 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC3Q92529 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC3Q92529 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SHC3Q92529 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC3Q92529 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC3Q92529 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.76■□□□□ 0.43
SHC3Q92529 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC3Q92529 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SHC3Q92529 AC023141.13-201ENST00000604991 943 ntBASIC17.76■□□□□ 0.43
SHC3Q92529 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SHC3Q92529 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC3Q92529 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC3Q92529 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SHC3Q92529 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SHC3Q92529 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC3Q92529 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SHC3Q92529 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SHC3Q92529 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SHC3Q92529 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.75■□□□□ 0.43
SHC3Q92529 SLC25A1P1-201ENST00000528351 927 ntBASIC17.75■□□□□ 0.43
SHC3Q92529 AC109635.5-201ENST00000533593 962 ntBASIC17.75■□□□□ 0.43
SHC3Q92529 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.75■□□□□ 0.43
SHC3Q92529 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SHC3Q92529 AC007064.4-201ENST00000637740 555 ntBASIC17.75■□□□□ 0.43
SHC3Q92529 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.75■□□□□ 0.43
SHC3Q92529 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.75■□□□□ 0.43
SHC3Q92529 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SHC3Q92529 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SHC3Q92529 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.75■□□□□ 0.43
SHC3Q92529 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SHC3Q92529 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.75■□□□□ 0.43
SHC3Q92529 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC3Q92529 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SHC3Q92529 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.74■□□□□ 0.43
SHC3Q92529 AL513523.2-202ENST00000427283 2040 ntBASIC17.74■□□□□ 0.43
SHC3Q92529 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms