Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 AP001063.1-201ENST00000568332 529 ntBASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 RHOXF1P1-202ENST00000635473 501 ntBASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 BCL2L12P1-201ENST00000508390 733 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 HNRNPRP1-201ENST00000453465 1695 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC093433.1-201ENST00000458048 571 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AP003398.1-201ENST00000531124 318 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AL353732.1-201ENST00000569618 1459 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 BID-212ENST00000614949 1988 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 GCSHP3-201ENST00000431120 391 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 HMGB1P24-201ENST00000611897 328 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC106760.1-201ENST00000508690 800 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 EEF1DP7-201ENST00000580496 513 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC110057.1-201ENST00000636031 898 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 MIR5001-201ENST00000580185 100 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AL031055.1-201ENST00000606362 631 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 AL132780.4-201ENST00000624870 1135 ntBASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE2Q8WXH0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AF274858.1-201ENST00000406288 372 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AC074044.1-201ENST00000609673 707 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms