Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 AL139400.1-201ENST00000366220 510 ntBASIC14.97□□□□□ -0.01
RNF138Q8WVD3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 AC005237.2-201ENST00000434368 219 ntBASIC14.97□□□□□ -0.01
RNF138Q8WVD3 HLA-J-203ENST00000494367 1087 ntBASIC14.97□□□□□ -0.01
RNF138Q8WVD3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 SNHG9-202ENST00000564014 471 ntBASIC14.97□□□□□ -0.01
RNF138Q8WVD3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 AL596442.2-201ENST00000610240 980 ntBASIC14.97□□□□□ -0.01
RNF138Q8WVD3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 PCDHA14-201ENST00000506751 2298 ntBASIC14.97□□□□□ -0.01
RNF138Q8WVD3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 MTHFR-217ENST00000641820 1569 ntBASIC14.97□□□□□ -0.01
RNF138Q8WVD3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 U82695.1-201ENST00000635752 1889 ntBASIC14.97□□□□□ -0.01
RNF138Q8WVD3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF138Q8WVD3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 KRT18P32-201ENST00000424695 1287 ntBASIC14.96□□□□□ -0.01
RNF138Q8WVD3 SPDYE14P-201ENST00000442619 822 ntBASIC14.96□□□□□ -0.01
RNF138Q8WVD3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 AC061975.2-201ENST00000581722 295 ntBASIC14.96□□□□□ -0.01
RNF138Q8WVD3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 AP001059.3-201ENST00000619053 235 ntBASIC14.96□□□□□ -0.01
RNF138Q8WVD3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF138Q8WVD3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
RNF138Q8WVD3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.96□□□□□ -0.02
RNF138Q8WVD3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF138Q8WVD3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.96□□□□□ -0.02
RNF138Q8WVD3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 AC005052.1-201ENST00000625181 2492 ntBASIC14.95□□□□□ -0.02
RNF138Q8WVD3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF138Q8WVD3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms