Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNED1Q8TER0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.02■□□□□ 0.8
SNED1Q8TER0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNED1Q8TER0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 RRP7BP-205ENST00000566851 833 ntBASIC20.02■□□□□ 0.8
SNED1Q8TER0 MIR4525-201ENST00000580000 75 ntBASIC20.02■□□□□ 0.8
SNED1Q8TER0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNED1Q8TER0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNED1Q8TER0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNED1Q8TER0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNED1Q8TER0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNED1Q8TER0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNED1Q8TER0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SNED1Q8TER0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNED1Q8TER0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNED1Q8TER0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNED1Q8TER0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNED1Q8TER0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNED1Q8TER0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNED1Q8TER0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
SNED1Q8TER0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.02■□□□□ 0.79
SNED1Q8TER0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.02■□□□□ 0.79
SNED1Q8TER0 KRT223P-202ENST00000449164 1292 ntBASIC20.02■□□□□ 0.79
SNED1Q8TER0 SDHAP3-202ENST00000515467 728 ntBASIC20.02■□□□□ 0.79
SNED1Q8TER0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.02■□□□□ 0.79
SNED1Q8TER0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.02■□□□□ 0.79
SNED1Q8TER0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.02■□□□□ 0.79
SNED1Q8TER0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNED1Q8TER0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 AC007389.4-201ENST00000454674 793 ntBASIC20.01■□□□□ 0.79
SNED1Q8TER0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.01■□□□□ 0.79
SNED1Q8TER0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNED1Q8TER0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20■□□□□ 0.79
SNED1Q8TER0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 REXO1L6P-201ENST00000603433 1515 ntBASIC20■□□□□ 0.79
SNED1Q8TER0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20■□□□□ 0.79
SNED1Q8TER0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNED1Q8TER0 AC092053.1-201ENST00000605787 1936 ntBASIC20■□□□□ 0.79
SNED1Q8TER0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20■□□□□ 0.79
SNED1Q8TER0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 FAM86MP-201ENST00000340703 885 ntBASIC20■□□□□ 0.79
SNED1Q8TER0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNED1Q8TER0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SNED1Q8TER0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20■□□□□ 0.79
SNED1Q8TER0 MEP1AP4-201ENST00000423244 1087 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms