Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 AC069262.1-201ENST00000539058 672 ntBASIC16.73■□□□□ 0.27
CHD5Q8TDI0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.73■□□□□ 0.27
CHD5Q8TDI0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHD5Q8TDI0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 SPCS2P4-201ENST00000436160 681 ntBASIC16.71■□□□□ 0.27
CHD5Q8TDI0 POU5F1P6-201ENST00000466990 990 ntBASIC16.71■□□□□ 0.27
CHD5Q8TDI0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 SPTSSB-204ENST00000617024 1292 ntBASIC16.71■□□□□ 0.27
CHD5Q8TDI0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 AC092183.1-201ENST00000469884 875 ntBASIC16.71■□□□□ 0.27
CHD5Q8TDI0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.71■□□□□ 0.27
CHD5Q8TDI0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.71■□□□□ 0.26
CHD5Q8TDI0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
CHD5Q8TDI0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHD5Q8TDI0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CHD5Q8TDI0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 AC051619.7-201ENST00000568314 623 ntBASIC16.7■□□□□ 0.26
CHD5Q8TDI0 MIR4321-201ENST00000592276 80 ntBASIC16.7■□□□□ 0.26
CHD5Q8TDI0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.7■□□□□ 0.26
CHD5Q8TDI0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.7■□□□□ 0.26
CHD5Q8TDI0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms