Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 AL021920.2-201ENST00000624828 1351 ntBASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 AL671710.1-201ENST00000610245 2349 ntBASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 TUBB8P12-201ENST00000308911 1335 ntBASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 TUBB7P-202ENST00000428444 1305 ntBASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 TUBB8P7-204ENST00000567960 1332 ntBASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 PMS2P1-201ENST00000431037 1228 ntBASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 GGTLC5P-201ENST00000617623 998 ntBASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 PGM5P2-202ENST00000637225 1043 ntBASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 CROCCP1-201ENST00000426910 5675 ntBASIC15.77■□□□□ 0.12
SIMC1Q8NDZ2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 LINC02199-201ENST00000506655 2702 ntBASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 AC104109.2-201ENST00000602919 1418 ntBASIC15.77■□□□□ 0.11
SIMC1Q8NDZ2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 TOP3BP1-201ENST00000420768 1380 ntBASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 AC008741.2-201ENST00000612792 3115 ntBASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 IGLL3P-201ENST00000412472 434 ntBASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 AL590627.1-203ENST00000421194 1026 ntBASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 AC034105.1-201ENST00000563488 319 ntBASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms