Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 USP32P1-208ENST00000506594 1164 ntBASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 DOC2GP-202ENST00000514950 1163 ntBASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 BNIP3P42-201ENST00000454982 569 ntBASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 BNIP3P29-201ENST00000598302 571 ntBASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 AC011447.5-201ENST00000616168 564 ntBASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 CD81-207ENST00000481687 890 ntTSL 2 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 AC105021.1-202ENST00000570572 669 ntBASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 AC133552.6-201ENST00000613406 534 ntBASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP43Q8NDM7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 ELK1P1-201ENST00000485699 580 ntBASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 MIR6775-201ENST00000617557 69 ntBASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CFAP43Q8NDM7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 AC068587.10-201ENST00000641210 219 ntBASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFAP43Q8NDM7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 AC092933.1-201ENST00000393644 945 ntBASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CFAP43Q8NDM7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms