Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AC016027.1-202ENST00000607927 1699 ntBASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 RPSAP43-201ENST00000402237 625 ntBASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 MKNK2P1-201ENST00000437526 628 ntBASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 DNAJB3-201ENST00000446806 729 ntBASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AC005829.1-201ENST00000570002 483 ntBASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AC020765.3-201ENST00000613051 740 ntBASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 AC005052.1-201ENST00000625181 2492 ntBASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 ME2P1-201ENST00000426028 1970 ntBASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 UPF3AP3-201ENST00000420996 769 ntBASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 GPX1P2-201ENST00000429271 606 ntBASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 AL671277.1-201ENST00000429656 993 ntBASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 ADH5P3-201ENST00000433842 1137 ntBASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 WASH6P-202ENST00000359512 1437 ntBASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ZIC4Q8N9L1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.71□□□□□ -0.06
ZIC4Q8N9L1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ZIC4Q8N9L1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
ZIC4Q8N9L1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
ZIC4Q8N9L1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.71□□□□□ -0.06
ZIC4Q8N9L1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ZIC4Q8N9L1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ZIC4Q8N9L1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.06
ZIC4Q8N9L1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ZIC4Q8N9L1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 PCGF3-213ENST00000620529 1899 ntBASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms