Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 KRT8P39-201ENST00000396270 1433 ntBASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 RPS2P28-201ENST00000314255 741 ntBASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 AC105339.3-201ENST00000560043 636 ntBASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 AC005412.3-201ENST00000580309 715 ntBASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 MIR1199-201ENST00000621445 119 ntBASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM1Q8N8F7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 AL512652.2-201ENST00000625156 1716 ntBASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 ALOX12P2-203ENST00000570921 1945 ntBASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 KRT18P67-201ENST00000432816 1264 ntBASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 DUSP5P1-201ENST00000441325 1139 ntBASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 AF186996.4-201ENST00000467186 377 ntBASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 AL356488.2-201ENST00000602755 427 ntBASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 GGT3P-204ENST00000453783 1664 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms