Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.48■□□□□ 0.07
TUBA1AQ71U36 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 FAM220CP-201ENST00000395253 831 ntBASIC15.47■□□□□ 0.07
TUBA1AQ71U36 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 AC011467.2-201ENST00000598425 242 ntBASIC15.47■□□□□ 0.07
TUBA1AQ71U36 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.47■□□□□ 0.07
TUBA1AQ71U36 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBA1AQ71U36 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 AC097374.2-201ENST00000618617 1306 ntBASIC15.46■□□□□ 0.07
TUBA1AQ71U36 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 KRT16P4-201ENST00000453883 522 ntBASIC15.46■□□□□ 0.07
TUBA1AQ71U36 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 AC111152.3-201ENST00000569699 673 ntBASIC15.46■□□□□ 0.07
TUBA1AQ71U36 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 INTS4P1-201ENST00000438455 1935 ntBASIC15.46■□□□□ 0.07
TUBA1AQ71U36 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms