Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPP4R3AQ6IN85 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPP4R3AQ6IN85 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPP4R3AQ6IN85 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.95■□□□□ 0.62
PPP4R3AQ6IN85 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.95■□□□□ 0.62
PPP4R3AQ6IN85 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPP4R3AQ6IN85 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 YBX2P1-201ENST00000394192 760 ntBASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 AC021097.1-201ENST00000607902 574 ntBASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PPP4R3AQ6IN85 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PPP4R3AQ6IN85 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 AC002056.1-201ENST00000395613 760 ntBASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms