Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKAL1Q5VV42 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 AC129492.6-201ENST00000611383 1305 ntBASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 UPK3BP1-201ENST00000428678 509 ntBASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 DUSP5P1-201ENST00000441325 1139 ntBASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 SAPCD2P3-201ENST00000455031 850 ntBASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 AC091304.2-201ENST00000564639 760 ntBASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKAL1Q5VV42 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 HCG4P8-203ENST00000443049 980 ntBASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 GGTLC5P-201ENST00000617623 998 ntBASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 LINC00554-201ENST00000564841 3011 ntBASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 LINC02447-202ENST00000501888 2146 ntBASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 AP005117.1-202ENST00000581724 1908 ntBASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 AC092384.3-202ENST00000564646 2873 ntBASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDKAL1Q5VV42 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 AP001350.2-201ENST00000625104 1094 ntBASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKAL1Q5VV42 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms