Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC091167.2-201ENST00000579581 588 ntBASIC16.47■□□□□ 0.23
CDKL1Q00532 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKL1Q00532 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKL1Q00532 MIR1199-201ENST00000621445 119 ntBASIC16.47■□□□□ 0.23
CDKL1Q00532 AL691432.3-201ENST00000621860 400 ntBASIC16.47■□□□□ 0.23
CDKL1Q00532 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKL1Q00532 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKL1Q00532 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKL1Q00532 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKL1Q00532 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 AC006538.1-201ENST00000567905 1585 ntBASIC16.47■□□□□ 0.23
CDKL1Q00532 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDKL1Q00532 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDKL1Q00532 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 CROCCP1-201ENST00000426910 5675 ntBASIC16.46■□□□□ 0.23
CDKL1Q00532 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.46■□□□□ 0.23
CDKL1Q00532 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.46■□□□□ 0.23
CDKL1Q00532 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 IGHV3-65-201ENST00000523210 341 ntBASIC16.46■□□□□ 0.23
CDKL1Q00532 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.46■□□□□ 0.23
CDKL1Q00532 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.46■□□□□ 0.23
CDKL1Q00532 RN7SL510P-201ENST00000581311 263 ntBASIC16.46■□□□□ 0.23
CDKL1Q00532 MPDU1-223ENST00000582151 728 ntBASIC16.46■□□□□ 0.23
CDKL1Q00532 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.46■□□□□ 0.23
CDKL1Q00532 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDKL1Q00532 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.46■□□□□ 0.23
CDKL1Q00532 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDKL1Q00532 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDKL1Q00532 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDKL1Q00532 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDKL1Q00532 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDKL1Q00532 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CDKL1Q00532 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.45■□□□□ 0.22
CDKL1Q00532 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.45■□□□□ 0.22
CDKL1Q00532 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CDKL1Q00532 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CDKL1Q00532 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 HNRNPDP1-201ENST00000439535 754 ntBASIC16.45■□□□□ 0.22
CDKL1Q00532 AC079781.3-201ENST00000449110 356 ntBASIC16.45■□□□□ 0.22
CDKL1Q00532 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.45■□□□□ 0.22
CDKL1Q00532 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.45■□□□□ 0.22
CDKL1Q00532 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.45■□□□□ 0.22
CDKL1Q00532 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.45■□□□□ 0.22
CDKL1Q00532 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 MIR4492-201ENST00000581627 80 ntBASIC16.45■□□□□ 0.22
CDKL1Q00532 AL356488.2-201ENST00000602755 427 ntBASIC16.45■□□□□ 0.22
CDKL1Q00532 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 AC005052.1-201ENST00000625181 2492 ntBASIC16.45■□□□□ 0.22
CDKL1Q00532 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.45■□□□□ 0.22
CDKL1Q00532 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.45■□□□□ 0.22
CDKL1Q00532 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDKL1Q00532 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDKL1Q00532 AC129492.6-201ENST00000611383 1305 ntBASIC16.45■□□□□ 0.22
CDKL1Q00532 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKL1Q00532 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDKL1Q00532 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKL1Q00532 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms