Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM4P67936 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 AC073508.3-201ENST00000619697 1419 ntBASIC18.78■□□□□ 0.6
TPM4P67936 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.78■□□□□ 0.6
TPM4P67936 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 AL020989.1-201ENST00000422979 469 ntBASIC18.78■□□□□ 0.6
TPM4P67936 AL596275.1-201ENST00000423464 877 ntBASIC18.78■□□□□ 0.6
TPM4P67936 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TPM4P67936 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TPM4P67936 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.78■□□□□ 0.6
TPM4P67936 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM4P67936 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM4P67936 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
TPM4P67936 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM4P67936 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.78■□□□□ 0.6
TPM4P67936 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPM4P67936 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM4P67936 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TPM4P67936 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 AC005052.1-201ENST00000625181 2492 ntBASIC18.77■□□□□ 0.6
TPM4P67936 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.77■□□□□ 0.6
TPM4P67936 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM4P67936 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TPM4P67936 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TPM4P67936 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.77■□□□□ 0.6
TPM4P67936 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TPM4P67936 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
TPM4P67936 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM4P67936 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.77■□□□□ 0.6
TPM4P67936 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TPM4P67936 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TPM4P67936 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.77■□□□□ 0.6
TPM4P67936 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.77■□□□□ 0.6
TPM4P67936 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.77■□□□□ 0.6
TPM4P67936 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM4P67936 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TPM4P67936 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.76■□□□□ 0.59
TPM4P67936 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM4P67936 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM4P67936 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TPM4P67936 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 AC005521.1-201ENST00000393351 872 ntBASIC18.76■□□□□ 0.59
TPM4P67936 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 NUS1P1-201ENST00000446295 882 ntBASIC18.76■□□□□ 0.59
TPM4P67936 AL671277.2-201ENST00000458060 996 ntBASIC18.76■□□□□ 0.59
TPM4P67936 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TPM4P67936 KRT8P26-201ENST00000534154 1276 ntBASIC18.76■□□□□ 0.59
TPM4P67936 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM4P67936 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.76■□□□□ 0.59
TPM4P67936 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.76■□□□□ 0.59
TPM4P67936 AC011498.5-201ENST00000592027 486 ntBASIC18.76■□□□□ 0.59
TPM4P67936 AC013467.2-201ENST00000605472 835 ntBASIC18.76■□□□□ 0.59
TPM4P67936 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM4P67936 AC002310.6-201ENST00000624451 1377 ntBASIC18.76■□□□□ 0.59
TPM4P67936 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM4P67936 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM4P67936 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM4P67936 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM4P67936 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TPM4P67936 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM4P67936 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM4P67936 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms