Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH11P55287 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CDH11P55287 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH11P55287 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH11P55287 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDH11P55287 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH11P55287 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH11P55287 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDH11P55287 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 ALOX12P2-203ENST00000570921 1945 ntBASIC15.35■□□□□ 0.05
CDH11P55287 TSPY26P-202ENST00000565928 3884 ntBASIC15.35■□□□□ 0.05
CDH11P55287 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH11P55287 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH11P55287 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH11P55287 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 AL590627.1-203ENST00000421194 1026 ntBASIC15.35■□□□□ 0.05
CDH11P55287 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH11P55287 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 FGFR3P6-201ENST00000457012 610 ntBASIC15.35■□□□□ 0.05
CDH11P55287 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 AC093909.1-201ENST00000504731 1122 ntBASIC15.35■□□□□ 0.05
CDH11P55287 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH11P55287 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH11P55287 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH11P55287 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.35■□□□□ 0.05
CDH11P55287 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
CDH11P55287 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH11P55287 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.35■□□□□ 0.05
CDH11P55287 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH11P55287 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH11P55287 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH11P55287 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH11P55287 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CDH11P55287 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH11P55287 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH11P55287 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 AC003669.1-201ENST00000334569 611 ntBASIC15.34■□□□□ 0.05
CDH11P55287 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH11P55287 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH11P55287 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 AL031284.1-201ENST00000419297 478 ntBASIC15.34■□□□□ 0.05
CDH11P55287 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH11P55287 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.34■□□□□ 0.05
CDH11P55287 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH11P55287 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH11P55287 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms