Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CDH4P55283 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CDH4P55283 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH4P55283 SPCS2P4-201ENST00000436160 681 ntBASIC17.02■□□□□ 0.32
CDH4P55283 AL592309.1-201ENST00000443127 649 ntBASIC17.02■□□□□ 0.32
CDH4P55283 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH4P55283 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH4P55283 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH4P55283 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH4P55283 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH4P55283 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH4P55283 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH4P55283 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH4P55283 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH4P55283 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH4P55283 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDH4P55283 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH4P55283 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDH4P55283 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH4P55283 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH4P55283 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDH4P55283 GGT4P-201ENST00000623672 1708 ntBASIC17.01■□□□□ 0.31
CDH4P55283 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH4P55283 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
CDH4P55283 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDH4P55283 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CDH4P55283 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH4P55283 IGHV3-62-201ENST00000520057 340 ntBASIC17.01■□□□□ 0.31
CDH4P55283 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH4P55283 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH4P55283 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH4P55283 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH4P55283 KRT8P23-201ENST00000560090 1207 ntBASIC17.01■□□□□ 0.31
CDH4P55283 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDH4P55283 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CDH4P55283 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.01■□□□□ 0.31
CDH4P55283 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH4P55283 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH4P55283 AC008267.7-201ENST00000624570 1194 ntBASIC17.01■□□□□ 0.31
CDH4P55283 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH4P55283 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDH4P55283 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH4P55283 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH4P55283 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH4P55283 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH4P55283 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH4P55283 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH4P55283 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
CDH4P55283 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17■□□□□ 0.31
CDH4P55283 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH4P55283 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CDH4P55283 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CDH4P55283 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17■□□□□ 0.31
CDH4P55283 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17■□□□□ 0.31
CDH4P55283 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CDH4P55283 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH4P55283 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17■□□□□ 0.31
CDH4P55283 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms