Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 RN7SL589P-201ENST00000481268 310 ntBASIC18.21■□□□□ 0.51
NCKAP1LP55160 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKAP1LP55160 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NCKAP1LP55160 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 MIR1233-2-201ENST00000408138 82 ntBASIC18.2■□□□□ 0.5
NCKAP1LP55160 MIR1233-1-201ENST00000408722 82 ntBASIC18.2■□□□□ 0.5
NCKAP1LP55160 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 AC105339.1-204ENST00000636249 355 ntBASIC18.2■□□□□ 0.5
NCKAP1LP55160 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 AC099398.1-201ENST00000567919 2776 ntBASIC18.2■□□□□ 0.5
NCKAP1LP55160 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
NCKAP1LP55160 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1LP55160 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 PCDHA14-201ENST00000506751 2298 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms