Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC4P55056 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
APOC4P55056 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
APOC4P55056 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC4P55056 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
APOC4P55056 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
APOC4P55056 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC4P55056 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC4P55056 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC4P55056 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
APOC4P55056 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
APOC4P55056 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
APOC4P55056 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
APOC4P55056 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC4P55056 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC4P55056 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC4P55056 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC4P55056 FAM86GP-201ENST00000448322 971 ntBASIC12.21□□□□□ -0.45
APOC4P55056 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC4P55056 AC067863.1-201ENST00000494933 530 ntBASIC12.21□□□□□ -0.45
APOC4P55056 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.21□□□□□ -0.45
APOC4P55056 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC4P55056 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
APOC4P55056 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC4P55056 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC4P55056 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 AC008267.7-201ENST00000624570 1194 ntBASIC12.21□□□□□ -0.45
APOC4P55056 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC4P55056 AC141586.5-201ENST00000624546 2050 ntBASIC12.21□□□□□ -0.45
APOC4P55056 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC4P55056 LINC00895-201ENST00000629028 1637 ntBASIC12.21□□□□□ -0.46
APOC4P55056 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
APOC4P55056 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
APOC4P55056 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.21□□□□□ -0.46
APOC4P55056 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.21□□□□□ -0.46
APOC4P55056 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
APOC4P55056 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC4P55056 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.2□□□□□ -0.46
APOC4P55056 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
APOC4P55056 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
APOC4P55056 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC4P55056 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.2□□□□□ -0.46
APOC4P55056 AC016027.1-202ENST00000607927 1699 ntBASIC12.2□□□□□ -0.46
APOC4P55056 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
APOC4P55056 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
APOC4P55056 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
APOC4P55056 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
APOC4P55056 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
APOC4P55056 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 AC092053.1-201ENST00000605787 1936 ntBASIC12.2□□□□□ -0.46
APOC4P55056 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.2□□□□□ -0.46
APOC4P55056 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC4P55056 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
APOC4P55056 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.2□□□□□ -0.46
APOC4P55056 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
APOC4P55056 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms