Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SMSP52788 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.7■□□□□ 0.1
SMSP52788 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.7■□□□□ 0.1
SMSP52788 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMSP52788 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SMSP52788 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SMSP52788 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.7■□□□□ 0.1
SMSP52788 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.7■□□□□ 0.1
SMSP52788 AP006288.1-201ENST00000446065 395 ntBASIC15.7■□□□□ 0.1
SMSP52788 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.7■□□□□ 0.1
SMSP52788 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.7■□□□□ 0.1
SMSP52788 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.7■□□□□ 0.1
SMSP52788 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SMSP52788 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 AC019129.2-201ENST00000609837 1235 ntBASIC15.7■□□□□ 0.1
SMSP52788 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.7■□□□□ 0.1
SMSP52788 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.7■□□□□ 0.1
SMSP52788 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.7■□□□□ 0.1
SMSP52788 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.7■□□□□ 0.1
SMSP52788 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMSP52788 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.7■□□□□ 0.1
SMSP52788 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 EGFEM1P-202ENST00000431685 1563 ntBASIC15.7■□□□□ 0.1
SMSP52788 PMPCAP1-201ENST00000508114 1576 ntBASIC15.7■□□□□ 0.1
SMSP52788 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMSP52788 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SMSP52788 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SMSP52788 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SMSP52788 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SMSP52788 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.69■□□□□ 0.1
SMSP52788 KRT18P27-201ENST00000427733 1299 ntBASIC15.69■□□□□ 0.1
SMSP52788 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.69■□□□□ 0.1
SMSP52788 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.69■□□□□ 0.1
SMSP52788 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 AL589182.2-201ENST00000619332 1049 ntBASIC15.69■□□□□ 0.1
SMSP52788 AC073592.4-201ENST00000623827 446 ntBASIC15.69■□□□□ 0.1
SMSP52788 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SMSP52788 AC002310.6-201ENST00000624451 1377 ntBASIC15.69■□□□□ 0.1
SMSP52788 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SMSP52788 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SMSP52788 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.69■□□□□ 0.1
SMSP52788 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMSP52788 KRT18P28-201ENST00000453838 1332 ntBASIC15.68■□□□□ 0.1
SMSP52788 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.68■□□□□ 0.1
SMSP52788 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SMSP52788 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.68■□□□□ 0.1
SMSP52788 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms