Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF144AP50876 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
RNF144AP50876 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF144AP50876 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF144AP50876 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF144AP50876 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF144AP50876 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF144AP50876 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF144AP50876 PAWRP1-201ENST00000451083 565 ntBASIC15.57■□□□□ 0.08
RNF144AP50876 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF144AP50876 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
RNF144AP50876 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF144AP50876 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.57■□□□□ 0.08
RNF144AP50876 AL773604.1-201ENST00000617417 272 ntBASIC15.57■□□□□ 0.08
RNF144AP50876 Z99916.3-201ENST00000623422 1080 ntBASIC15.57■□□□□ 0.08
RNF144AP50876 AL805961.1-202ENST00000641562 540 ntBASIC15.57■□□□□ 0.08
RNF144AP50876 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 AL021920.2-201ENST00000624828 1351 ntBASIC15.57■□□□□ 0.08
RNF144AP50876 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RNF144AP50876 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF144AP50876 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF144AP50876 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF144AP50876 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF144AP50876 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
RNF144AP50876 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RNF144AP50876 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RNF144AP50876 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF144AP50876 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF144AP50876 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF144AP50876 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF144AP50876 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 AL671710.1-201ENST00000610245 2349 ntBASIC15.56■□□□□ 0.08
RNF144AP50876 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF144AP50876 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF144AP50876 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RNF144AP50876 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF144AP50876 AC098831.1-202ENST00000438821 336 ntBASIC15.56■□□□□ 0.08
RNF144AP50876 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.56■□□□□ 0.08
RNF144AP50876 FAAHP1-202ENST00000446499 1238 ntBASIC15.56■□□□□ 0.08
RNF144AP50876 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF144AP50876 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF144AP50876 SLC25A6P4-201ENST00000586535 553 ntBASIC15.56■□□□□ 0.08
RNF144AP50876 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF144AP50876 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF144AP50876 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 TUBB8P12-201ENST00000308911 1335 ntBASIC15.56■□□□□ 0.08
RNF144AP50876 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 TUBB7P-202ENST00000428444 1305 ntBASIC15.56■□□□□ 0.08
RNF144AP50876 TUBB8P7-204ENST00000567960 1332 ntBASIC15.56■□□□□ 0.08
RNF144AP50876 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RNF144AP50876 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF144AP50876 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF144AP50876 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF144AP50876 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNF144AP50876 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF144AP50876 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF144AP50876 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RNF144AP50876 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF144AP50876 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF144AP50876 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms