Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KNTC1P50748 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KNTC1P50748 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
KNTC1P50748 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KNTC1P50748 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
KNTC1P50748 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.77■□□□□ 0.12
KNTC1P50748 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.77■□□□□ 0.12
KNTC1P50748 AC087499.6-201ENST00000411576 835 ntBASIC15.77■□□□□ 0.12
KNTC1P50748 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KNTC1P50748 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.77■□□□□ 0.12
KNTC1P50748 RN7SL618P-201ENST00000477850 296 ntBASIC15.77■□□□□ 0.12
KNTC1P50748 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KNTC1P50748 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.77■□□□□ 0.12
KNTC1P50748 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KNTC1P50748 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KNTC1P50748 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KNTC1P50748 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KNTC1P50748 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KNTC1P50748 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
KNTC1P50748 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KNTC1P50748 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.77■□□□□ 0.11
KNTC1P50748 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.77■□□□□ 0.11
KNTC1P50748 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.77■□□□□ 0.11
KNTC1P50748 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KNTC1P50748 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KNTC1P50748 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.77■□□□□ 0.11
KNTC1P50748 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.77■□□□□ 0.11
KNTC1P50748 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KNTC1P50748 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.76■□□□□ 0.11
KNTC1P50748 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KNTC1P50748 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.76■□□□□ 0.11
KNTC1P50748 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.76■□□□□ 0.11
KNTC1P50748 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.76■□□□□ 0.11
KNTC1P50748 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.76■□□□□ 0.11
KNTC1P50748 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.76■□□□□ 0.11
KNTC1P50748 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.76■□□□□ 0.11
KNTC1P50748 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KNTC1P50748 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.76■□□□□ 0.11
KNTC1P50748 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
KNTC1P50748 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.76■□□□□ 0.11
KNTC1P50748 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.76■□□□□ 0.11
KNTC1P50748 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.76■□□□□ 0.11
KNTC1P50748 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.76■□□□□ 0.11
KNTC1P50748 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.76■□□□□ 0.11
KNTC1P50748 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.76■□□□□ 0.11
KNTC1P50748 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.76■□□□□ 0.11
KNTC1P50748 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
KNTC1P50748 AC007431.3-201ENST00000623221 587 ntBASIC15.76■□□□□ 0.11
KNTC1P50748 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KNTC1P50748 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
KNTC1P50748 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.76■□□□□ 0.11
KNTC1P50748 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
KNTC1P50748 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.76■□□□□ 0.11
KNTC1P50748 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
KNTC1P50748 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
KNTC1P50748 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.76■□□□□ 0.11
KNTC1P50748 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.75■□□□□ 0.11
KNTC1P50748 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.75■□□□□ 0.11
KNTC1P50748 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.75■□□□□ 0.11
KNTC1P50748 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.75■□□□□ 0.11
KNTC1P50748 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
KNTC1P50748 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
KNTC1P50748 WASH4P-201ENST00000564273 1246 ntBASIC15.75■□□□□ 0.11
KNTC1P50748 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.75■□□□□ 0.11
KNTC1P50748 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.75■□□□□ 0.11
KNTC1P50748 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
KNTC1P50748 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
KNTC1P50748 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KNTC1P50748 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms