Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PCDHA3-202ENST00000532566 4594 ntBASIC13.26□□□□□ -0.29
CDC34P49427 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 AC010491.1-201ENST00000563101 2797 ntBASIC13.26□□□□□ -0.29
CDC34P49427 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC34P49427 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC34P49427 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CDC34P49427 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC34P49427 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 AL049757.1-201ENST00000616842 1596 ntBASIC13.25□□□□□ -0.29
CDC34P49427 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.25□□□□□ -0.29
CDC34P49427 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDC34P49427 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.25□□□□□ -0.29
CDC34P49427 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.25□□□□□ -0.29
CDC34P49427 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.25□□□□□ -0.29
CDC34P49427 GPR32P1-201ENST00000601788 811 ntBASIC13.25□□□□□ -0.29
CDC34P49427 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CDC34P49427 FAM87A-204ENST00000613235 858 ntBASIC13.25□□□□□ -0.29
CDC34P49427 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 AC097376.2-205ENST00000610159 5334 ntBASIC13.25□□□□□ -0.29
CDC34P49427 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CDC34P49427 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC34P49427 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC34P49427 AP002414.2-201ENST00000591780 3365 ntBASIC13.24□□□□□ -0.29
CDC34P49427 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.24□□□□□ -0.29
CDC34P49427 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 AC009336.1-201ENST00000608941 1553 ntBASIC13.24□□□□□ -0.29
CDC34P49427 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CDC34P49427 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 AL021920.2-201ENST00000624828 1351 ntBASIC13.24□□□□□ -0.29
CDC34P49427 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
CDC34P49427 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CDC34P49427 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.24□□□□□ -0.29
CDC34P49427 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 FAM8A6P-201ENST00000407496 1135 ntBASIC13.24□□□□□ -0.29
CDC34P49427 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 HLA-F-220ENST00000434407 884 ntBASIC13.24□□□□□ -0.29
CDC34P49427 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.24□□□□□ -0.29
CDC34P49427 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 ZNF444P1-201ENST00000559497 298 ntBASIC13.24□□□□□ -0.29
CDC34P49427 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms