Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CHRNA4P43681 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
CHRNA4P43681 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CHRNA4P43681 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA4P43681 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CHRNA4P43681 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CHRNA4P43681 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CHRNA4P43681 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 ZNF259P1-201ENST00000407656 1365 ntBASIC16.83■□□□□ 0.28
CHRNA4P43681 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA4P43681 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA4P43681 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA4P43681 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNA4P43681 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.83■□□□□ 0.28
CHRNA4P43681 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.83■□□□□ 0.28
CHRNA4P43681 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNA4P43681 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CHRNA4P43681 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNA4P43681 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA4P43681 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.83■□□□□ 0.28
CHRNA4P43681 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA4P43681 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA4P43681 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA4P43681 AC140113.2-201ENST00000604370 208 ntBASIC16.83■□□□□ 0.28
CHRNA4P43681 AC006449.5-201ENST00000610658 2098 ntBASIC16.83■□□□□ 0.28
CHRNA4P43681 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA4P43681 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA4P43681 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA4P43681 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA4P43681 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA4P43681 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA4P43681 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA4P43681 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA4P43681 AC025580.3-201ENST00000617932 1424 ntBASIC16.82■□□□□ 0.28
CHRNA4P43681 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA4P43681 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CHRNA4P43681 BCAR1-209ENST00000546196 1340 ntBASIC16.82■□□□□ 0.28
CHRNA4P43681 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA4P43681 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA4P43681 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA4P43681 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNA4P43681 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA4P43681 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA4P43681 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNA4P43681 AC004877.2-201ENST00000623941 599 ntBASIC16.82■□□□□ 0.28
CHRNA4P43681 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA4P43681 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CHRNA4P43681 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA4P43681 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA4P43681 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA4P43681 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA4P43681 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA4P43681 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA4P43681 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA4P43681 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNA4P43681 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNA4P43681 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA4P43681 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA4P43681 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA4P43681 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 RNU1-129P-201ENST00000384064 167 ntBASIC16.81■□□□□ 0.28
CHRNA4P43681 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA4P43681 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms