Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HNF4AP41235 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HNF4AP41235 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.23■□□□□ 0.19
HNF4AP41235 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 AL590627.1-203ENST00000421194 1026 ntBASIC16.23■□□□□ 0.19
HNF4AP41235 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HNF4AP41235 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.23■□□□□ 0.19
HNF4AP41235 RNA5SP415-201ENST00000517246 115 ntBASIC16.23■□□□□ 0.19
HNF4AP41235 IGHV3-65-201ENST00000523210 341 ntBASIC16.23■□□□□ 0.19
HNF4AP41235 UNC93B6-202ENST00000528242 690 ntBASIC16.23■□□□□ 0.19
HNF4AP41235 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.23■□□□□ 0.19
HNF4AP41235 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.23■□□□□ 0.19
HNF4AP41235 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.23■□□□□ 0.19
HNF4AP41235 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.23■□□□□ 0.19
HNF4AP41235 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.23■□□□□ 0.19
HNF4AP41235 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.23■□□□□ 0.19
HNF4AP41235 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.23■□□□□ 0.19
HNF4AP41235 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.23■□□□□ 0.19
HNF4AP41235 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.23■□□□□ 0.19
HNF4AP41235 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HNF4AP41235 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HNF4AP41235 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.23■□□□□ 0.19
HNF4AP41235 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.23■□□□□ 0.19
HNF4AP41235 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HNF4AP41235 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HNF4AP41235 AL353732.1-201ENST00000569618 1459 ntBASIC16.22■□□□□ 0.19
HNF4AP41235 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HNF4AP41235 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
HNF4AP41235 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.22■□□□□ 0.19
HNF4AP41235 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HNF4AP41235 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.22■□□□□ 0.19
HNF4AP41235 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HNF4AP41235 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.22■□□□□ 0.19
HNF4AP41235 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
HNF4AP41235 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.22■□□□□ 0.19
HNF4AP41235 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.22■□□□□ 0.19
HNF4AP41235 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.22■□□□□ 0.19
HNF4AP41235 AC108073.2-201ENST00000464002 357 ntBASIC16.22■□□□□ 0.19
HNF4AP41235 AC108751.1-201ENST00000490852 363 ntBASIC16.22■□□□□ 0.19
HNF4AP41235 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.22■□□□□ 0.19
HNF4AP41235 MIR4751-201ENST00000578027 74 ntBASIC16.22■□□□□ 0.19
HNF4AP41235 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.22■□□□□ 0.19
HNF4AP41235 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.22■□□□□ 0.19
HNF4AP41235 AC120114.3-201ENST00000611923 658 ntBASIC16.22■□□□□ 0.19
HNF4AP41235 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
HNF4AP41235 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.22■□□□□ 0.19
HNF4AP41235 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.22■□□□□ 0.19
HNF4AP41235 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HNF4AP41235 AC131009.4-201ENST00000624048 1740 ntBASIC16.22■□□□□ 0.19
HNF4AP41235 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HNF4AP41235 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HNF4AP41235 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HNF4AP41235 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
HNF4AP41235 IL9RP2-201ENST00000423948 1312 ntBASIC16.21■□□□□ 0.19
HNF4AP41235 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.21■□□□□ 0.19
HNF4AP41235 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.21■□□□□ 0.19
HNF4AP41235 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HNF4AP41235 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.21■□□□□ 0.19
HNF4AP41235 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HNF4AP41235 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.21■□□□□ 0.19
HNF4AP41235 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HNF4AP41235 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HNF4AP41235 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.21■□□□□ 0.19
HNF4AP41235 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
HNF4AP41235 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.21■□□□□ 0.19
HNF4AP41235 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.21■□□□□ 0.19
HNF4AP41235 AC107918.2-201ENST00000530817 355 ntBASIC16.21■□□□□ 0.19
HNF4AP41235 AC005412.3-201ENST00000580309 715 ntBASIC16.21■□□□□ 0.19
HNF4AP41235 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.21■□□□□ 0.19
HNF4AP41235 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.21■□□□□ 0.19
HNF4AP41235 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.21■□□□□ 0.19
HNF4AP41235 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HNF4AP41235 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HNF4AP41235 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.21■□□□□ 0.19
HNF4AP41235 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HNF4AP41235 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
HNF4AP41235 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.21■□□□□ 0.18
HNF4AP41235 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HNF4AP41235 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HNF4AP41235 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HNF4AP41235 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms