Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.26■□□□□ 0.51
USP8P40818 AC073648.2-201ENST00000510116 352 ntBASIC18.26■□□□□ 0.51
USP8P40818 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.26■□□□□ 0.51
USP8P40818 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.26■□□□□ 0.51
USP8P40818 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
USP8P40818 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
USP8P40818 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.26■□□□□ 0.51
USP8P40818 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.26■□□□□ 0.51
USP8P40818 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.26■□□□□ 0.51
USP8P40818 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
USP8P40818 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.26■□□□□ 0.51
USP8P40818 AL021920.2-201ENST00000624828 1351 ntBASIC18.26■□□□□ 0.51
USP8P40818 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.26■□□□□ 0.51
USP8P40818 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
USP8P40818 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
USP8P40818 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 LINC00554-201ENST00000564841 3011 ntBASIC18.25■□□□□ 0.51
USP8P40818 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 AP002414.1-201ENST00000391405 1147 ntBASIC18.25■□□□□ 0.51
USP8P40818 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.25■□□□□ 0.51
USP8P40818 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.25■□□□□ 0.51
USP8P40818 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
USP8P40818 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.25■□□□□ 0.51
USP8P40818 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.25■□□□□ 0.51
USP8P40818 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.25■□□□□ 0.51
USP8P40818 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.25■□□□□ 0.51
USP8P40818 TERC-201ENST00000602385 541 ntBASIC18.25■□□□□ 0.51
USP8P40818 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.25■□□□□ 0.51
USP8P40818 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.25■□□□□ 0.51
USP8P40818 AC004706.3-202ENST00000621574 984 ntBASIC18.25■□□□□ 0.51
USP8P40818 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.25■□□□□ 0.51
USP8P40818 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.25■□□□□ 0.51
USP8P40818 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.25■□□□□ 0.51
USP8P40818 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.25■□□□□ 0.51
USP8P40818 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.25■□□□□ 0.51
USP8P40818 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP8P40818 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
USP8P40818 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
USP8P40818 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
USP8P40818 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
USP8P40818 PTCHD3P3-201ENST00000403073 906 ntBASIC18.24■□□□□ 0.51
USP8P40818 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.24■□□□□ 0.51
USP8P40818 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.24■□□□□ 0.51
USP8P40818 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
USP8P40818 FAM197Y8-203ENST00000450145 560 ntBASIC18.24■□□□□ 0.51
USP8P40818 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.24■□□□□ 0.51
USP8P40818 OR7E14P-202ENST00000530490 1290 ntBASIC18.24■□□□□ 0.51
USP8P40818 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
USP8P40818 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.24■□□□□ 0.51
USP8P40818 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 AC006504.4-201ENST00000592118 1568 ntBASIC18.24■□□□□ 0.51
USP8P40818 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
USP8P40818 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP8P40818 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
USP8P40818 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 PI4KAP1-204ENST00000612579 1703 ntBASIC18.23■□□□□ 0.51
USP8P40818 AL645728.1-201ENST00000366221 2101 ntBASIC18.23■□□□□ 0.51
USP8P40818 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms