Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
PDE6BP35913 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.35■□□□□ 0.85
PDE6BP35913 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PDE6BP35913 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.35■□□□□ 0.85
PDE6BP35913 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.35■□□□□ 0.85
PDE6BP35913 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.35■□□□□ 0.85
PDE6BP35913 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.35■□□□□ 0.85
PDE6BP35913 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.35■□□□□ 0.85
PDE6BP35913 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.35■□□□□ 0.85
PDE6BP35913 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.35■□□□□ 0.85
PDE6BP35913 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 COX11-210ENST00000639671 696 ntBASIC20.35■□□□□ 0.85
PDE6BP35913 AL033527.4-201ENST00000641026 673 ntBASIC20.35■□□□□ 0.85
PDE6BP35913 AL109936.8-201ENST00000641772 604 ntBASIC20.35■□□□□ 0.85
PDE6BP35913 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDE6BP35913 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 SNX33P1-201ENST00000592116 1762 ntBASIC20.34■□□□□ 0.85
PDE6BP35913 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 AL589702.1-201ENST00000641229 1509 ntBASIC20.34■□□□□ 0.85
PDE6BP35913 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDE6BP35913 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
PDE6BP35913 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PDE6BP35913 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDE6BP35913 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.34■□□□□ 0.85
PDE6BP35913 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.34■□□□□ 0.85
PDE6BP35913 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.34■□□□□ 0.85
PDE6BP35913 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.34■□□□□ 0.85
PDE6BP35913 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.34■□□□□ 0.85
PDE6BP35913 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 AC119751.2-201ENST00000504529 210 ntBASIC20.34■□□□□ 0.85
PDE6BP35913 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.34■□□□□ 0.85
PDE6BP35913 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.34■□□□□ 0.85
PDE6BP35913 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.34■□□□□ 0.85
PDE6BP35913 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.34■□□□□ 0.85
PDE6BP35913 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.34■□□□□ 0.85
PDE6BP35913 AC133552.6-201ENST00000613406 534 ntBASIC20.34■□□□□ 0.85
PDE6BP35913 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.34■□□□□ 0.85
PDE6BP35913 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDE6BP35913 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDE6BP35913 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDE6BP35913 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6BP35913 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PDE6BP35913 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDE6BP35913 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6BP35913 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6BP35913 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6BP35913 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PDE6BP35913 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6BP35913 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6BP35913 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
PDE6BP35913 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6BP35913 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6BP35913 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6BP35913 AC098850.1-201ENST00000419919 790 ntBASIC20.33■□□□□ 0.85
PDE6BP35913 TMEM14DP-201ENST00000422205 345 ntBASIC20.33■□□□□ 0.85
PDE6BP35913 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.33■□□□□ 0.85
PDE6BP35913 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.33■□□□□ 0.85
PDE6BP35913 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.33■□□□□ 0.85
PDE6BP35913 KRT223P-202ENST00000449164 1292 ntBASIC20.33■□□□□ 0.85
PDE6BP35913 AL589987.1-201ENST00000453380 819 ntBASIC20.33■□□□□ 0.85
PDE6BP35913 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.33■□□□□ 0.85
PDE6BP35913 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.33■□□□□ 0.85
PDE6BP35913 AL606495.2-201ENST00000605867 535 ntBASIC20.33■□□□□ 0.85
PDE6BP35913 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.33■□□□□ 0.85
PDE6BP35913 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
PDE6BP35913 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6BP35913 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6BP35913 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.33■□□□□ 0.84
PDE6BP35913 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.33■□□□□ 0.84
PDE6BP35913 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6BP35913 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6BP35913 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms