Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.61■□□□□ 0.41
RFC1P35251 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RFC1P35251 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.61■□□□□ 0.41
RFC1P35251 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RFC1P35251 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RFC1P35251 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.61■□□□□ 0.41
RFC1P35251 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RFC1P35251 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.61■□□□□ 0.41
RFC1P35251 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.61■□□□□ 0.41
RFC1P35251 MIR4751-201ENST00000578027 74 ntBASIC17.61■□□□□ 0.41
RFC1P35251 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.61■□□□□ 0.41
RFC1P35251 CYP2A7P1-201ENST00000595391 815 ntBASIC17.61■□□□□ 0.41
RFC1P35251 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.61■□□□□ 0.41
RFC1P35251 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
RFC1P35251 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.61■□□□□ 0.41
RFC1P35251 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RFC1P35251 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.61■□□□□ 0.41
RFC1P35251 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.61■□□□□ 0.41
RFC1P35251 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.61■□□□□ 0.41
RFC1P35251 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.6■□□□□ 0.41
RFC1P35251 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFC1P35251 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFC1P35251 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.6■□□□□ 0.41
RFC1P35251 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RFC1P35251 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RFC1P35251 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFC1P35251 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RFC1P35251 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.6■□□□□ 0.41
RFC1P35251 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.6■□□□□ 0.41
RFC1P35251 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.6■□□□□ 0.41
RFC1P35251 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.6■□□□□ 0.41
RFC1P35251 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.6■□□□□ 0.41
RFC1P35251 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RFC1P35251 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RFC1P35251 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC1P35251 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFC1P35251 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 PCDH8P1-201ENST00000428983 2773 ntBASIC17.59■□□□□ 0.41
RFC1P35251 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 KRT8P39-201ENST00000396270 1433 ntBASIC17.59■□□□□ 0.41
RFC1P35251 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC1P35251 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.59■□□□□ 0.41
RFC1P35251 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC1P35251 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.59■□□□□ 0.41
RFC1P35251 VN2R19P-201ENST00000442399 1052 ntBASIC17.59■□□□□ 0.41
RFC1P35251 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RFC1P35251 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC1P35251 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.59■□□□□ 0.41
RFC1P35251 AC087641.1-201ENST00000557561 1021 ntBASIC17.59■□□□□ 0.41
RFC1P35251 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC1P35251 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC1P35251 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.59■□□□□ 0.41
RFC1P35251 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC1P35251 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 TNRC18P3-201ENST00000441896 2691 ntBASIC17.59■□□□□ 0.41
RFC1P35251 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RFC1P35251 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC1P35251 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC1P35251 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
RFC1P35251 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.58■□□□□ 0.41
RFC1P35251 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFC1P35251 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms