Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.03□□□□□ -0.16
LMO1P25800 MRPL20P1-201ENST00000400819 433 ntBASIC14.03□□□□□ -0.16
LMO1P25800 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO1P25800 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.03□□□□□ -0.16
LMO1P25800 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO1P25800 CYP2A7P1-201ENST00000595391 815 ntBASIC14.03□□□□□ -0.16
LMO1P25800 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.03□□□□□ -0.16
LMO1P25800 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO1P25800 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 AP002414.3-201ENST00000589352 1468 ntBASIC14.03□□□□□ -0.16
LMO1P25800 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO1P25800 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.03□□□□□ -0.16
LMO1P25800 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO1P25800 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO1P25800 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO1P25800 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO1P25800 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.02□□□□□ -0.16
LMO1P25800 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 AC092384.3-202ENST00000564646 2873 ntBASIC14.02□□□□□ -0.16
LMO1P25800 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.02□□□□□ -0.16
LMO1P25800 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LMO1P25800 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.02□□□□□ -0.16
LMO1P25800 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 GGT3P-204ENST00000453783 1664 ntBASIC14.02□□□□□ -0.16
LMO1P25800 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO1P25800 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.02□□□□□ -0.16
LMO1P25800 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO1P25800 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LMO1P25800 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LMO1P25800 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO1P25800 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.02□□□□□ -0.17
LMO1P25800 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO1P25800 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO1P25800 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO1P25800 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO1P25800 OR7E47P-204ENST00000575924 449 ntBASIC14.02□□□□□ -0.17
LMO1P25800 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO1P25800 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LMO1P25800 AL773604.1-201ENST00000617417 272 ntBASIC14.02□□□□□ -0.17
LMO1P25800 AL031008.1-201ENST00000619963 541 ntBASIC14.02□□□□□ -0.17
LMO1P25800 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.02□□□□□ -0.17
LMO1P25800 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LMO1P25800 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms