Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC093028.1-201ENST00000622998 982 ntBASIC14.1□□□□□ -0.15
COL8A2P25067 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.1□□□□□ -0.15
COL8A2P25067 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.1□□□□□ -0.15
COL8A2P25067 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
COL8A2P25067 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.1□□□□□ -0.15
COL8A2P25067 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
COL8A2P25067 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
COL8A2P25067 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.09□□□□□ -0.15
COL8A2P25067 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.09□□□□□ -0.15
COL8A2P25067 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
COL8A2P25067 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.09□□□□□ -0.15
COL8A2P25067 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.09□□□□□ -0.15
COL8A2P25067 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
COL8A2P25067 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.09□□□□□ -0.15
COL8A2P25067 AL627223.1-201ENST00000416693 442 ntBASIC14.09□□□□□ -0.15
COL8A2P25067 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.09□□□□□ -0.15
COL8A2P25067 RN7SL589P-201ENST00000481268 310 ntBASIC14.09□□□□□ -0.15
COL8A2P25067 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.09□□□□□ -0.15
COL8A2P25067 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.09□□□□□ -0.15
COL8A2P25067 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.09□□□□□ -0.15
COL8A2P25067 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.09□□□□□ -0.15
COL8A2P25067 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.09□□□□□ -0.15
COL8A2P25067 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
COL8A2P25067 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 LINC00628-201ENST00000628516 1289 ntBASIC14.09□□□□□ -0.15
COL8A2P25067 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
COL8A2P25067 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 AC008741.2-201ENST00000612792 3115 ntBASIC14.09□□□□□ -0.15
COL8A2P25067 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.09□□□□□ -0.15
COL8A2P25067 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 TUBB8P12-201ENST00000308911 1335 ntBASIC14.09□□□□□ -0.15
COL8A2P25067 TUBB7P-202ENST00000428444 1305 ntBASIC14.09□□□□□ -0.15
COL8A2P25067 TUBB8P7-204ENST00000567960 1332 ntBASIC14.09□□□□□ -0.15
COL8A2P25067 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.09□□□□□ -0.15
COL8A2P25067 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.09□□□□□ -0.15
COL8A2P25067 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.09□□□□□ -0.15
COL8A2P25067 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.09□□□□□ -0.15
COL8A2P25067 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL8A2P25067 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
COL8A2P25067 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
COL8A2P25067 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.08□□□□□ -0.15
COL8A2P25067 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.08□□□□□ -0.16
COL8A2P25067 PCDHB17P-201ENST00000539533 2393 ntBASIC14.08□□□□□ -0.16
COL8A2P25067 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
COL8A2P25067 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.08□□□□□ -0.16
COL8A2P25067 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
COL8A2P25067 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.08□□□□□ -0.16
COL8A2P25067 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.08□□□□□ -0.16
COL8A2P25067 SPCS2P4-201ENST00000436160 681 ntBASIC14.08□□□□□ -0.16
COL8A2P25067 HMGN1P19-201ENST00000436976 333 ntBASIC14.08□□□□□ -0.16
COL8A2P25067 IGHV3-62-201ENST00000520057 340 ntBASIC14.08□□□□□ -0.16
COL8A2P25067 RFPL4AP1-201ENST00000530883 850 ntBASIC14.08□□□□□ -0.16
COL8A2P25067 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.08□□□□□ -0.16
COL8A2P25067 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.08□□□□□ -0.16
COL8A2P25067 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.08□□□□□ -0.16
COL8A2P25067 AC106028.4-201ENST00000614509 607 ntBASIC14.08□□□□□ -0.16
COL8A2P25067 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.08□□□□□ -0.16
COL8A2P25067 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.08□□□□□ -0.16
COL8A2P25067 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
COL8A2P25067 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.08□□□□□ -0.16
COL8A2P25067 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.08□□□□□ -0.16
COL8A2P25067 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms