Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL1P22362 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCL1P22362 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL1P22362 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCL1P22362 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCL1P22362 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL1P22362 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CCL1P22362 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL1P22362 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL1P22362 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL1P22362 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 AC105339.3-201ENST00000560043 636 ntBASIC14.35□□□□□ -0.11
CCL1P22362 OR7E47P-204ENST00000575924 449 ntBASIC14.35□□□□□ -0.11
CCL1P22362 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 AC012313.10-201ENST00000623509 926 ntBASIC14.35□□□□□ -0.11
CCL1P22362 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL1P22362 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL1P22362 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL1P22362 REXO1L8P-201ENST00000604378 1897 ntBASIC14.35□□□□□ -0.11
CCL1P22362 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL1P22362 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCL1P22362 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL1P22362 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL1P22362 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
CCL1P22362 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 MRPL20P1-201ENST00000400819 433 ntBASIC14.34□□□□□ -0.11
CCL1P22362 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL1P22362 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.34□□□□□ -0.11
CCL1P22362 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.34□□□□□ -0.11
CCL1P22362 TP73-AS1-207ENST00000624167 988 ntBASIC14.34□□□□□ -0.11
CCL1P22362 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 AC012569.1-201ENST00000591191 1524 ntBASIC14.34□□□□□ -0.11
CCL1P22362 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CCL1P22362 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL1P22362 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL1P22362 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CCL1P22362 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.33□□□□□ -0.11
CCL1P22362 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCL1P22362 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms