Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AC122714.2-201ENST00000502787 707 ntBASIC17.35■□□□□ 0.37
H2AFXP16104 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.35■□□□□ 0.37
H2AFXP16104 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H2AFXP16104 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H2AFXP16104 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.35■□□□□ 0.37
H2AFXP16104 AL137784.2-201ENST00000607332 1000 ntBASIC17.35■□□□□ 0.37
H2AFXP16104 MIR5787-201ENST00000611784 55 ntBASIC17.35■□□□□ 0.37
H2AFXP16104 AC073912.3-201ENST00000624414 853 ntBASIC17.35■□□□□ 0.37
H2AFXP16104 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.35■□□□□ 0.37
H2AFXP16104 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H2AFXP16104 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2AFXP16104 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H2AFXP16104 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2AFXP16104 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H2AFXP16104 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H2AFXP16104 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.35■□□□□ 0.37
H2AFXP16104 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2AFXP16104 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.35■□□□□ 0.37
H2AFXP16104 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2AFXP16104 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.34■□□□□ 0.37
H2AFXP16104 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
H2AFXP16104 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.34■□□□□ 0.37
H2AFXP16104 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.34■□□□□ 0.37
H2AFXP16104 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.34■□□□□ 0.37
H2AFXP16104 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.34■□□□□ 0.37
H2AFXP16104 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.34■□□□□ 0.37
H2AFXP16104 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.34■□□□□ 0.37
H2AFXP16104 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.34■□□□□ 0.37
H2AFXP16104 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2AFXP16104 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
H2AFXP16104 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
H2AFXP16104 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
H2AFXP16104 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.34■□□□□ 0.37
H2AFXP16104 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
H2AFXP16104 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.33■□□□□ 0.37
H2AFXP16104 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.33■□□□□ 0.37
H2AFXP16104 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
H2AFXP16104 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
H2AFXP16104 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.33■□□□□ 0.37
H2AFXP16104 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
H2AFXP16104 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.33■□□□□ 0.37
H2AFXP16104 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2AFXP16104 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2AFXP16104 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.33■□□□□ 0.37
H2AFXP16104 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
H2AFXP16104 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2AFXP16104 AL353593.2-201ENST00000602529 1483 ntBASIC17.33■□□□□ 0.37
H2AFXP16104 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.33■□□□□ 0.36
H2AFXP16104 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
H2AFXP16104 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2AFXP16104 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.33■□□□□ 0.36
H2AFXP16104 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.33■□□□□ 0.36
H2AFXP16104 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.33■□□□□ 0.36
H2AFXP16104 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.33■□□□□ 0.36
H2AFXP16104 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H2AFXP16104 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.33■□□□□ 0.36
H2AFXP16104 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.33■□□□□ 0.36
H2AFXP16104 NEK4P2-201ENST00000580004 1012 ntBASIC17.33■□□□□ 0.36
H2AFXP16104 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H2AFXP16104 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
H2AFXP16104 AC010653.2-201ENST00000623505 997 ntBASIC17.33■□□□□ 0.36
H2AFXP16104 AC116562.4-202ENST00000641738 218 ntBASIC17.33■□□□□ 0.36
H2AFXP16104 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2AFXP16104 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H2AFXP16104 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2AFXP16104 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.33■□□□□ 0.36
H2AFXP16104 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2AFXP16104 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.33■□□□□ 0.36
H2AFXP16104 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2AFXP16104 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
H2AFXP16104 AC087481.3-201ENST00000602886 1894 ntBASIC17.33■□□□□ 0.36
H2AFXP16104 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
H2AFXP16104 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H2AFXP16104 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
H2AFXP16104 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.33■□□□□ 0.36
H2AFXP16104 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
H2AFXP16104 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.32■□□□□ 0.36
H2AFXP16104 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
H2AFXP16104 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H2AFXP16104 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
H2AFXP16104 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
H2AFXP16104 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms