Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 GPAA1P2-202ENST00000606848 1787 ntBASIC17.82■□□□□ 0.44
FAM228BP0C875 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM228BP0C875 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM228BP0C875 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM228BP0C875 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.82■□□□□ 0.44
FAM228BP0C875 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.82■□□□□ 0.44
FAM228BP0C875 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.82■□□□□ 0.44
FAM228BP0C875 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM228BP0C875 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.82■□□□□ 0.44
FAM228BP0C875 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM228BP0C875 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.82■□□□□ 0.44
FAM228BP0C875 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM228BP0C875 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
FAM228BP0C875 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.82■□□□□ 0.44
FAM228BP0C875 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.82■□□□□ 0.44
FAM228BP0C875 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.82■□□□□ 0.44
FAM228BP0C875 AC107918.4-202ENST00000641623 219 ntBASIC17.82■□□□□ 0.44
FAM228BP0C875 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM228BP0C875 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM228BP0C875 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM228BP0C875 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM228BP0C875 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM228BP0C875 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.82■□□□□ 0.44
FAM228BP0C875 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
FAM228BP0C875 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.82■□□□□ 0.44
FAM228BP0C875 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
FAM228BP0C875 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
FAM228BP0C875 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
FAM228BP0C875 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.81■□□□□ 0.44
FAM228BP0C875 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FAM228BP0C875 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
FAM228BP0C875 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.81■□□□□ 0.44
FAM228BP0C875 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.81■□□□□ 0.44
FAM228BP0C875 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.81■□□□□ 0.44
FAM228BP0C875 LAGE3P1-201ENST00000425356 484 ntBASIC17.81■□□□□ 0.44
FAM228BP0C875 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.81■□□□□ 0.44
FAM228BP0C875 SAPCD2P3-201ENST00000455031 850 ntBASIC17.81■□□□□ 0.44
FAM228BP0C875 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.81■□□□□ 0.44
FAM228BP0C875 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.81■□□□□ 0.44
FAM228BP0C875 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.81■□□□□ 0.44
FAM228BP0C875 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.81■□□□□ 0.44
FAM228BP0C875 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.81■□□□□ 0.44
FAM228BP0C875 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.81■□□□□ 0.44
FAM228BP0C875 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FAM228BP0C875 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FAM228BP0C875 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
FAM228BP0C875 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FAM228BP0C875 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FAM228BP0C875 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FAM228BP0C875 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.8■□□□□ 0.44
FAM228BP0C875 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.8■□□□□ 0.44
FAM228BP0C875 AC073621.1-201ENST00000392730 636 ntBASIC17.8■□□□□ 0.44
FAM228BP0C875 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.8■□□□□ 0.44
FAM228BP0C875 KRT18P27-201ENST00000427733 1299 ntBASIC17.8■□□□□ 0.44
FAM228BP0C875 RPS15P9-201ENST00000494093 319 ntBASIC17.8■□□□□ 0.44
FAM228BP0C875 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 PRELID1P1-202ENST00000567272 903 ntBASIC17.8■□□□□ 0.44
FAM228BP0C875 AC006557.2-201ENST00000592985 1240 ntBASIC17.8■□□□□ 0.44
FAM228BP0C875 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FAM228BP0C875 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FAM228BP0C875 AL353732.1-201ENST00000569618 1459 ntBASIC17.8■□□□□ 0.44
FAM228BP0C875 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.8■□□□□ 0.44
FAM228BP0C875 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FAM228BP0C875 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 REXO1L8P-201ENST00000604378 1897 ntBASIC17.8■□□□□ 0.44
FAM228BP0C875 PCGF3-213ENST00000620529 1899 ntBASIC17.8■□□□□ 0.44
FAM228BP0C875 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM228BP0C875 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM228BP0C875 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.79■□□□□ 0.44
FAM228BP0C875 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
FAM228BP0C875 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.79■□□□□ 0.44
FAM228BP0C875 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.79■□□□□ 0.44
FAM228BP0C875 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
FAM228BP0C875 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
FAM228BP0C875 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FAM228BP0C875 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.79■□□□□ 0.44
FAM228BP0C875 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
FAM228BP0C875 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms