Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TUBB3P1-201ENST00000405796 1332 ntBASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 AC124947.2-201ENST00000547118 1133 ntBASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 MIR4492-201ENST00000581627 80 ntBASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 CYP2A7P1-201ENST00000595391 815 ntBASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 MIR346-201ENST00000362234 95 ntBASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 AC026150.2-201ENST00000564693 1156 ntBASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 AC027307.2-201ENST00000591252 911 ntBASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40ALP0C0E4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
RAB40ALP0C0E4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40ALP0C0E4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.71■□□□□ 0.1
RAB40ALP0C0E4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40ALP0C0E4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40ALP0C0E4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40ALP0C0E4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 KLF2P3-201ENST00000451977 1087 ntBASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms