Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.75■□□□□ 0.11
CTSBP07858 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.75■□□□□ 0.11
CTSBP07858 AC142381.1-201ENST00000426099 345 ntBASIC15.75■□□□□ 0.11
CTSBP07858 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.75■□□□□ 0.11
CTSBP07858 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.75■□□□□ 0.11
CTSBP07858 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CTSBP07858 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.75■□□□□ 0.11
CTSBP07858 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.75■□□□□ 0.11
CTSBP07858 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSBP07858 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.75■□□□□ 0.11
CTSBP07858 KRT8P23-201ENST00000560090 1207 ntBASIC15.75■□□□□ 0.11
CTSBP07858 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.75■□□□□ 0.11
CTSBP07858 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.75■□□□□ 0.11
CTSBP07858 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.75■□□□□ 0.11
CTSBP07858 AC093512.1-201ENST00000617969 520 ntBASIC15.75■□□□□ 0.11
CTSBP07858 AL139011.1-202ENST00000642063 584 ntBASIC15.75■□□□□ 0.11
CTSBP07858 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CTSBP07858 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTSBP07858 AD000864.1-201ENST00000624076 2295 ntBASIC15.75■□□□□ 0.11
CTSBP07858 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSBP07858 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSBP07858 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.75■□□□□ 0.11
CTSBP07858 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CTSBP07858 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSBP07858 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSBP07858 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTSBP07858 AC006538.1-201ENST00000567905 1585 ntBASIC15.75■□□□□ 0.11
CTSBP07858 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSBP07858 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSBP07858 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.74■□□□□ 0.11
CTSBP07858 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CTSBP07858 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.74■□□□□ 0.11
CTSBP07858 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CTSBP07858 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.74■□□□□ 0.11
CTSBP07858 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.74■□□□□ 0.11
CTSBP07858 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.74■□□□□ 0.11
CTSBP07858 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.74■□□□□ 0.11
CTSBP07858 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.74■□□□□ 0.11
CTSBP07858 AP002490.2-201ENST00000524791 560 ntBASIC15.74■□□□□ 0.11
CTSBP07858 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
CTSBP07858 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.74■□□□□ 0.11
CTSBP07858 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.74■□□□□ 0.11
CTSBP07858 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.74■□□□□ 0.11
CTSBP07858 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.74■□□□□ 0.11
CTSBP07858 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.74■□□□□ 0.11
CTSBP07858 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.74■□□□□ 0.11
CTSBP07858 AC005052.1-201ENST00000625181 2492 ntBASIC15.74■□□□□ 0.11
CTSBP07858 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CTSBP07858 AC008677.1-201ENST00000519230 1561 ntBASIC15.74■□□□□ 0.11
CTSBP07858 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CTSBP07858 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTSBP07858 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.73■□□□□ 0.11
CTSBP07858 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.73■□□□□ 0.11
CTSBP07858 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.73■□□□□ 0.11
CTSBP07858 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.73■□□□□ 0.11
CTSBP07858 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.73■□□□□ 0.11
CTSBP07858 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CTSBP07858 GPAA1P2-202ENST00000606848 1787 ntBASIC15.73■□□□□ 0.11
CTSBP07858 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CTSBP07858 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CTSBP07858 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSBP07858 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.73■□□□□ 0.11
CTSBP07858 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.73■□□□□ 0.11
CTSBP07858 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.73■□□□□ 0.11
CTSBP07858 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.73■□□□□ 0.11
CTSBP07858 DUX4L27-201ENST00000554796 1261 ntBASIC15.73■□□□□ 0.11
CTSBP07858 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.73■□□□□ 0.11
CTSBP07858 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.73■□□□□ 0.11
CTSBP07858 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms