Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
MT-ND1P03886 KLF4P1-201ENST00000412782 1185 ntBASIC15.81■□□□□ 0.12
MT-ND1P03886 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.81■□□□□ 0.12
MT-ND1P03886 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 BX276092.5-203ENST00000456199 560 ntBASIC15.81■□□□□ 0.12
MT-ND1P03886 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.81■□□□□ 0.12
MT-ND1P03886 VENTXP7-201ENST00000475503 772 ntBASIC15.81■□□□□ 0.12
MT-ND1P03886 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 AC009533.2-201ENST00000543664 586 ntBASIC15.81■□□□□ 0.12
MT-ND1P03886 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 DUX4L17-201ENST00000557360 1267 ntBASIC15.81■□□□□ 0.12
MT-ND1P03886 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.81■□□□□ 0.12
MT-ND1P03886 AL121672.3-201ENST00000608644 468 ntBASIC15.81■□□□□ 0.12
MT-ND1P03886 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
MT-ND1P03886 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
MT-ND1P03886 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MT-ND1P03886 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.81■□□□□ 0.12
MT-ND1P03886 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 AL603832.2-201ENST00000566195 2125 ntBASIC15.8■□□□□ 0.12
MT-ND1P03886 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.8■□□□□ 0.12
MT-ND1P03886 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
MT-ND1P03886 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.8■□□□□ 0.12
MT-ND1P03886 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.8■□□□□ 0.12
MT-ND1P03886 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 AC005332.1-201ENST00000577698 1310 ntBASIC15.8■□□□□ 0.12
MT-ND1P03886 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 CHCHD2P8-201ENST00000429873 447 ntBASIC15.8■□□□□ 0.12
MT-ND1P03886 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
MT-ND1P03886 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.8■□□□□ 0.12
MT-ND1P03886 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.8■□□□□ 0.12
MT-ND1P03886 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MT-ND1P03886 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.8■□□□□ 0.12
MT-ND1P03886 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.8■□□□□ 0.12
MT-ND1P03886 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.8■□□□□ 0.12
MT-ND1P03886 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.8■□□□□ 0.12
MT-ND1P03886 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND1P03886 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND1P03886 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
MT-ND1P03886 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms